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Merge pull request #36 from khwolf/vancouver

pull/42/head
Martin Monperrus 10 years ago
parent
commit
ef0563951a
  1. 129
      bibtexbrowser.php

129
bibtexbrowser.php

@ -133,8 +133,9 @@ function bibtexbrowser_configure($key, $value) {
@define('BIBTEXBROWSER_DEBUG',false); @define('BIBTEXBROWSER_DEBUG',false);
@define('COMMA_NAMES',false);// do have authors in a comma separated form?
@define('FORCE_NAMELIST_SEPARATOR', ''); // if non-empty, use this to separate multiple names regardless of COMMA_NAMES
@define('USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT',false);// do have authors in a comma separated form?
@define('USE_INITIALS_FOR_NAMES',false); // use only initials for all first names
@define('FORCE_NAMELIST_SEPARATOR', ''); // if non-empty, use this to separate multiple names regardless of USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT
@define('TYPES_SIZE',10); // number of entry types per table @define('TYPES_SIZE',10); // number of entry types per table
@define('YEAR_SIZE',20); // number of years per table @define('YEAR_SIZE',20); // number of years per table
@define('AUTHORS_SIZE',30); // number of authors per table @define('AUTHORS_SIZE',30); // number of authors per table
@ -1278,12 +1279,15 @@ class BibEntry {
} }
/** /**
* Returns the formated author name w.r.t to the user preference encoded in COMMA_NAMES
* Returns the formated author name w.r.t to the user preference encoded in USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT
*/ */
function formatAuthor($author){ function formatAuthor($author){
if (COMMA_NAMES) {
if (USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT) {
return $this->formatAuthorCommaSeparated($author); return $this->formatAuthorCommaSeparated($author);
} else if (USE_INITIALS_FOR_NAMES) {
return $this->formatAuthorInitials($author);
} }
else return $this->formatAuthorCanonical($author); else return $this->formatAuthorCanonical($author);
} }
@ -1305,6 +1309,16 @@ class BibEntry {
else return $lastname; else return $lastname;
} }
/**
* Returns the formated author name as "LastName Initials".
* e.g. for Vancouver-style used by PubMed.
*/
function formatAuthorInitials($author){
list($firstname, $lastname) = splitFullName($author);
if ($firstname!='') return $lastname.' '.preg_replace("/(\p{Lu})\w*[- ]*/S","$1", $firstname);
else return $lastname;
}
/** Returns the authors as an array of strings (one string per author) */ /** Returns the authors as an array of strings (one string per author) */
function getFormattedAuthors() { function getFormattedAuthors() {
@ -1320,7 +1334,7 @@ class BibEntry {
*/ */
function formattedAuthors() { return $this->getFormattedAuthorsImproved(); } function formattedAuthors() { return $this->getFormattedAuthorsImproved(); }
/** Adds to getFormattedAuthors() the home page links and returns a string (not an array). Is configured with BIBTEXBROWSER_AUTHOR_LINKS and COMMA_NAMES.
/** Adds to getFormattedAuthors() the home page links and returns a string (not an array). Is configured with BIBTEXBROWSER_AUTHOR_LINKS and USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT.
*/ */
function getFormattedAuthorsImproved() { function getFormattedAuthorsImproved() {
$array_authors = $this->getFormattedAuthors(); $array_authors = $this->getFormattedAuthors();
@ -1337,7 +1351,7 @@ class BibEntry {
} }
} }
if (COMMA_NAMES) {$sep = '; ';} else {$sep = ', ';}
if (USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT) {$sep = '; ';} else {$sep = ', ';}
if (FORCE_NAMELIST_SEPARATOR !== '') {$sep = FORCE_NAMELIST_SEPARATOR;} if (FORCE_NAMELIST_SEPARATOR !== '') {$sep = FORCE_NAMELIST_SEPARATOR;}
return implode($sep ,$array_authors); return implode($sep ,$array_authors);
@ -1410,7 +1424,7 @@ class BibEntry {
foreach ($this->getEditors() as $editor) { foreach ($this->getEditors() as $editor) {
$editors[]=$this->addHomepageLink($this->formatAuthor($editor)); $editors[]=$this->addHomepageLink($this->formatAuthor($editor));
} }
if (COMMA_NAMES) {$sep = '; ';} else {$sep = ', ';}
if (USE_COMMA_AS_NAME_SEPARATOR_IN_OUTPUT) {$sep = '; ';} else {$sep = ', ';}
if (FORCE_NAMELIST_SEPARATOR !== '') {$sep = FORCE_NAMELIST_SEPARATOR;} if (FORCE_NAMELIST_SEPARATOR !== '') {$sep = FORCE_NAMELIST_SEPARATOR;}
return implode($sep, $editors).', '.(count($editors)>1?'eds.':'ed.'); return implode($sep, $editors).', '.(count($editors)>1?'eds.':'ed.');
} }
@ -2177,6 +2191,107 @@ function JanosBibliographyStyle(&$bibentry) {
} }
/** Bibtexbrowser style producing vancouver style often used in medicine.
*
* See: Patrias K. Citing medicine: the NLM style guide for authors, editors,
* and publishers [Internet]. 2nd ed. Wendling DL, technical editor.
* Bethesda (MD): National Library of Medicine (US); 2007 -
* [updated 2011 Sep 15; cited 2015 April 18].
* Available from: http://www.nlm.nih.gov/citingmedicine
*
* usage: Add the following lines to "bibtexbrowser.local.php"
<pre>
define('BIBLIOGRAPHYSTYLE','VancouverBibliographyStyle');
define('USE_INITIALS_FOR_NAMES',true);
</pre>
*/
function VancouverBibliographyStyle(&$bibentry) {
$title = $bibentry->getTitle();
$type = $bibentry->getType();
$entry=array();
// author
if ($bibentry->hasField('author')) {
$entry[] = $bibentry->formattedAuthors().'. ';
}
// Ensure punctuation mark at title's end
if (strpos(":.;,?!", substr(rtrim($title), -1)) > 0) {
$title = $title . ' ';
} else {
$title = $title . '. ';
}
if ($bibentry->hasField('url')) {
$title = ' <a'.(BIBTEXBROWSER_BIB_IN_NEW_WINDOW?' target="_blank" ':'').' href="'.$bibentry->getField('url').'">'.$title.'</a>';
}
$entry[] = $title;
$booktitle = '';
//// ******* EDITOR
$editor='';
if ($bibentry->hasField(EDITOR)) {
$editor = $bibentry->getFormattedEditors() . ' ';
}
if (($type=="misc") && $bibentry->hasField("note")) {
$booktitle = $editor;
$booktitle = $bibentry->getField("note");
} else if ($type=="inproceedings") {
$booktitle = 'In: ' . $editor . $bibentry->getField(BOOKTITLE);
} else if ($type=="incollection") {
$booktitle = 'Chapter in ';
if ($editor!='') $booktitle .= $editor;
$booktitle .= $bibentry->getField(BOOKTITLE);
} else if ($type=="article") {
$booktitle = $bibentry->getField("journal");
}
if ($booktitle!='') {
$entry[] = $booktitle . '. ';
}
$publisher='';
if ($type=="phdthesis") {
$publisher = 'PhD thesis, '.$bibentry->getField(SCHOOL);
} else if ($type=="mastersthesis") {
$publisher = 'Master\'s thesis, '.$bibentry->getField(SCHOOL);
} else if ($type=="techreport") {
$publisher = 'Technical report, '.$bibentry->getField("institution");
}
if ($bibentry->hasField("publisher")) {
$publisher = $bibentry->getField("publisher");
}
if ($publisher!='') {
if ($bibentry->hasField('address')) {
$entry[] = $bibentry->getField("address").': ';
}
$entry[] = $publisher . "; ";
}
if ($bibentry->hasField(YEAR)) $entry[] = $bibentry->getYear();
if ($bibentry->hasField('volume')) $entry[] = ";".$bibentry->getField("volume");
if ($bibentry->hasField('number')) $entry[] = '('.$bibentry->getField("number").')';
if ($bibentry->hasField('pages')) $entry[] = str_replace("--", "-", ":".$bibentry->getField("pages"));
$result = implode($entry).'.';
// some comments (e.g. acceptance rate)?
if ($bibentry->hasField('comment')) {
$result .= " (".$bibentry->getField("comment").")";
}
// add the Coin URL
$result .= "\n".$bibentry->toCoins();
return $result;
}

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